Package: SpiceFP 0.1.2

SpiceFP: Sparse Method to Identify Joint Effects of Functional Predictors

A set of functions allowing to implement the 'SpiceFP' approach which is iterative. It involves transformation of functional predictors into several candidate explanatory matrices (based on contingency tables), to which relative edge matrices with contiguity constraints are associated. Generalized Fused Lasso regression are performed in order to identify the best candidate matrix, the best class intervals and related coefficients at each iteration. The approach is stopped when the maximal number of iterations is reached or when retained coefficients are zeros. Supplementary functions allow to get coefficients of any candidate matrix or mean of coefficients of many candidates.

Authors:Girault Gnanguenon Guesse [aut, cre], Patrice Loisel [aut], Benedicte Fontez [aut], Nadine Hilgert [aut], Thierry Simonneau [ctr], Isabelle Sanchez [ctr]

SpiceFP_0.1.2.tar.gz
SpiceFP_0.1.2.zip(r-4.5)SpiceFP_0.1.2.zip(r-4.4)SpiceFP_0.1.2.zip(r-4.3)
SpiceFP_0.1.2.tgz(r-4.4-any)SpiceFP_0.1.2.tgz(r-4.3-any)
SpiceFP_0.1.2.tar.gz(r-4.5-noble)SpiceFP_0.1.2.tar.gz(r-4.4-noble)
SpiceFP_0.1.2.tgz(r-4.4-emscripten)SpiceFP_0.1.2.tgz(r-4.3-emscripten)
SpiceFP.pdf |SpiceFP.html
SpiceFP/json (API)

# Install 'SpiceFP' in R:
install.packages('SpiceFP', repos = c('https://giraultg.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/giraultg/spicefp/issues

Datasets:

On CRAN:

3.70 score 1 scripts 174 downloads 11 exports 29 dependencies

Last updated 2 years agofrom:0fda57ffa1. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 23 2024
R-4.5-winOKNov 23 2024
R-4.5-linuxOKNov 23 2024
R-4.4-winOKNov 23 2024
R-4.4-macOKNov 23 2024
R-4.3-winOKNov 23 2024
R-4.3-macOKNov 23 2024

Exports:candidatescoef_spicefpevaluate.candidatesfinemeshed2dfinemeshed3dgetD3dSparsehist_2dhist_3dlogbreaksmeancoefspicefp

Dependencies:clicodetoolscpp11doParalleldplyrfansiforeachgenericsgenlassoglueigraphiteratorslatticelifecyclemagrittrMatrixpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr

2021SpiceFP

Rendered fromarticle_SpiceFP.Rnwusingutils::Sweaveon Nov 23 2024.

Last update: 2021-07-29
Started: 2021-07-29